nmrglue.fileio.pipe.pipe_2d

class nmrglue.fileio.pipe.pipe_2d(filename, order=(0, 1))[source]

Emulate a ndarray objects without loading data into memory for low memory reading of 2D NMRPipe files.

  • slicing operations return ndarray objects.

  • can iterate over with expected results.

  • transpose and swapaxes methods create a new objects with correct axes ordering.

  • has ndim, shape, and dtype attributes.

Parameters
filenamestr

Filename of 2D NMRPipe file.

ordertuple

Ordering of axes against file.

__init__(filename, order=(0, 1))[source]

Create and set up object

Methods

__init__(filename[, order])

Create and set up object

swapaxes(axis1, axis2)

Return object with axis1 and axis2 interchanged.

transpose(*axes)

Return object with axes transposed.