Seperated interleaved example¶
This example is taken from Listing S5 in the 2013 JBNMR nmrglue paper. In this example a pseudo-3D NMRPipe data set is seperated into 2D data sets using the script seperate.py.
Execute python seperate.py to seperate the pseudo-3D data set into 2D data sets. Six directories with names techo_XXXX.fid will be created.
The data used in this example is available for download.
import nmrglue as ng # read in the NMR data dic, data = ng.varian.read('arrayed_data.fid') # set the new size of the separated data dic['nblocks'] = data.shape # loop over the echo times, separating and saving each 2D for i, techo in enumerate(dic['procpar']['techo']['values']): dir_name = 'techo_' + techo + '.fid' print "Creating directory:", dir_name ng.varian.write(dir_name, dic, data[:, i, :], overwrite=True)